RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14417 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-07-11 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Prevotella |
| Species: | melaninogenica |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella |
| Original ID: | ATCC 25845 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002122 |
| Peptide Genbank Accession: | ADK95225 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome from the Human Microbiome Project. Type strain synonyms Finegold B282; ATCC 25845; CCUG 4944 B; CIP 105346; DSM 7089; JCM 6325; NCTC 12963; VPI 4196; VPI 15087. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAGATAAAATTCAATTCAGACGCACGTGAACTCTTGAAGAGTGGTGTTGAT CAGTTGGCAAATGCAGTGAAGGTAACACTCGGTCCTAAGGGGCGTAATGTTGTTATCGGT AAGAAGTTTGGTGCTCCACAGATTACTAAGGACGGTGTTACCGTTGCTAAGGAGGTAGAG CTTGAGGATAACTTTGAGAATGCAGGTGCACAGCTTGTTAAGAGTGTAGCAAGCAAGACT GGTGATGATGCTGGTGACGGTACAACAACTGCTACTATCCTCACACAGGCAATTGTTACT GAAGGATTGAAGAATGTTACAGCAGGTGCAAACCCAATGGACCTTAAGCGTGGTATCGAC AAGGCTGTAGCTAAGGTTGTTGATCATATTAAGGCTTCTGCAGAGGTAGTTGGTGACAAC TATGACAAGATAGAGCAGGTAGCTACTGTAAGTGCTAACAACGATCCTGAAATAGGTAAG TTGCTTGCAGATGCTATGCGTAAGGTATCTAAGGATGGTGTTATCACTATTGAAGAGAGC AAGACTCGTGAGACAAGTATCGGTGTTGTTGAGGGTATGCAGTTTGATCGTGGTTACCTC TCTGGTTACTTCGTAACAGATACAGATAAGATGGAGTGTGATATGGAGAACCCATATATC CTCATCTACGATAAGAAGATTTCAAACGTTAAGGACTTCCTTCCAATCCTACAGCCAGCT GCTGAGAGTGGTCGTCCATTATTGGTCATTGCAGAGGATGTTGACTCAGAGGCATTGACA ACATTGGTTGTAAACCGTCTTCGTGCAGGTTTGAAGATTTGTGCTGTTAAGGCTCCAGGC TTTGGCGACCGTCGCAAAGCAATGCTTGAGGATATCGCTGTGTTGACAGGTGGTGTGGTA ATCAGCGAGGAGAAGGGTCTTTCACTTGATAAGGCAACTCTTGAGATGTTGGGTACAGCT AAGAAGGTTACCATTTCTAAGGACAATACAACAATCGTTGATGGTGCTGGTGAGAAGGAA GCAATCAAGGACCGTGTGGCTCAAATTAAGAACGAGATTGCAGCTTCAACAAGCTCATAC GATAAGGAGAAGTTGCAGGAGCGCTTGGCTAAGCTCTCTGGTGGTGTAGCTGTTCTCTAT GTTGGTGCTAACTCTGAGGTAGAGATGAAGGAGAAGAAGGACCGTGTTGACGATGCTCTT TGCGCTACTCGTGCTGCAATGGAAGAGGGTGTAGTTGTTGGTGGTGGTACCACTTACATC CGTGCTCAAGAAGCATTGAAGGACCTTAAGGGTGAGAATGCTGACGAGCAGACAGGTATC AATATTGTTTGTCGTGCTATTGAGGAGCCTCTCCGTCAGATTATCGCTAATGCAGGTGGT GAAGGTGCTGTTGTAGTAAATAAAGTTCGTGAGGGTAAGGGTGACTATGGTTACAATGCT CGCAAGGATGTTTATGAGGACCTTCGTGCTGCAGGTGTTATCGACCCAGCTAAGGTTTCT CGTGTTGCACTTGAGAATGCAGCTTCAATTGCAGGTATGTTCCTGACAACTGAGTGTCTT ATTGTAGACAAGGTTGAGGATACTCCAGCTATGCCAGCTGCTCCAGGTATGGGTGGTATG ATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFNSDARELLKSGVDQLANAVKVTLGPKGRNVVIGKKFGAPQITKDGVTVAKEVE LEDNFENAGAQLVKSVASKTGDDAGDGTTTATILTQAIVTEGLKNVTAGANPMDLKRGID KAVAKVVDHIKASAEVVGDNYDKIEQVATVSANNDPEIGKLLADAMRKVSKDGVITIEES KTRETSIGVVEGMQFDRGYLSGYFVTDTDKMECDMENPYILIYDKKISNVKDFLPILQPA AESGRPLLVIAEDVDSEALTTLVVNRLRAGLKICAVKAPGFGDRRKAMLEDIAVLTGGVV ISEEKGLSLDKATLEMLGTAKKVTISKDNTTIVDGAGEKEAIKDRVAQIKNEIAASTSSY DKEKLQERLAKLSGGVAVLYVGANSEVEMKEKKDRVDDALCATRAAMEEGVVVGGGTTYI RAQEALKDLKGENADEQTGINIVCRAIEEPLRQIIANAGGEGAVVVNKVREGKGDYGYNA RKDVYEDLRAAGVIDPAKVSRVALENAASIAGMFLTTECLIVDKVEDTPAMPAAPGMGGM M |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA AGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTATCT AAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAACGTT AAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTCATT GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT TTGAAGATTTGTGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATILTQAIVTEGLKNVTAGANPMDLKRGIDKAVAKVVDHIKASAEVVGDNYDKIEQVATV SANNDPEIGKLLADAMRKVSKDGVITIEESKTRETSIGVVEGMQFDRGYLSGYFVTDTDK MECDMENPYILIYDKKISNVKDFLPILQPAAESGRPLLVIAEDVDSEALTTLVVNRLRAG LKICAV |