RECORD DETAILS
For pacc CP001859, see also: b17874
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b16010 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-01-17 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Acidaminococcus |
| Species: | fermentans |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Veillonellaceae; Acidaminococcus |
| Original ID: | DSM 20731 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP001859 |
| Peptide Genbank Accession: | ADB47790 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms VR4 = ATCC 25085 = CCUG 9996 = CIP 106432 = DSM 20731. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAACTGATTAAATTTGATGAAGATGCCCGCCGCGGCCTGGAACGCGGTGTCAAT GCCCTGGCTGATGCCGTAAAGGTAACCCTGGGGCCCAAAGGCCGGAACGTTGTACTGGAA AAGAAATTCGGTTCTCCCACCATCACCAATGATGGGGTGACCATTGCCAAGGACATCGAA CTGGAAGATCCGTTCGAAAACATGGGCGCCGCCCTGGTCCGTGAAGTAGCCACCAAGACC AACGACATCGCCGGCGATGGGACCACCACCGCTACGGTCCTGGCCCAGTCCATCGTCCAT GAAGGGATGAAGAACGTGGTGGCCGGTGCCAACCCCATGGTCCTGAAGAAAGGGATCAAG AAAGCCACCGATGCCCTGGTGGACGAACTGAAGAAGAGCGCAAAGACCGTAAGCACCAAG GAAGAAAAGGCACAGGTTGCCTCCATTTCCGCCGGTGACGAAGAAATCGGCGGCCTGATC GCCGATGCCATGGAAAAAGTGGGCAACGACGGGGTCATCACCGTGGAAGAATCCAAGACC ATGGAAACTTCCCTGGAAACCGTGAAAGGCATGCAGTTCGACCGTGGGTACATCTCCCCC TACATGGTAACGGATCCGGACAAGATGGAAGCCGTTATGAGCAATCCGTACGTATTCATT ACGGATCGGAAGATCACTCTGATCAACGACATTATGCCCGTACTGGAAAAAGTGGTGCAA CAGGGCCGTGAACTGCTGATCATCGCTGAAGACGTGGAAGGCGAAGCCCTGGCCACCCTG GTTGTGAACCGTCTGCGTGGCACCTTCAAGGCTGTAGCTGTGAAGGCTCCTGGCTTCGGT GACCGCCGGAAGGCCATGCTGCAGGATATCGCCACCCTGACCGGTGCCACCGTGATCAGT GAAGAAGTGGGCCGGAAACTGGACAGCGCTACCCTGGCTGACCTGGGTACTGCCGGTCAG GTACGGGTGACCAAGGACATGACCACCATCGTGGACGGCGGCGGCGACAAACAGGCCGTG GCTGACCGGGTGGCTTCCATCAAGGCCCAGATCCCTGAAACCACTTCCCAGTTCGACAAG GAAAAACTCCAGGAACGCCTGGCCAAACTGTCCGGCGGCGTAGCCGTAATCAAGGTTGGG GCTGCCACCGAAACCGAACTGAAAGACAAGAAACTGCGTATCGAAGATGCCCTGAACGCC ACCCGTGCTGCTGTGGCGGAAGGCATTGTGGCCGGCGGCGGCACTGCCCTGCTGCAGGTA CAGCCGGTACTGGATGAACTGGAAGCCAAGGCTGAAGGGGACGAAAAGACCGGTATCGAT ATCGTAAGACGGGCCATTGAAGCACCGGTACGGCAGATCGCCAGCAACGCCGGTCTGGAA GGGGCCGTCATCGTGGAAGCCGTGAAGAAGGCTGCCAAGGGCACCGGCTTCAACGCTGCC ACCGAAGAATATGTGGACATGATCAAAGCCGGTATCGTGGATCCCTGCAAAGTGACCCGT TCTGCTCTCCAGAACGCCGCTTCCATCGCTTCCATGATCCTGACCACGGAAGCCGTAGTA GCCGACAAACCGGCTGAAAAAGGCGCTGCTCCCGCTCCTGCCATGGGCGGCGGCATGCCG GGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKLIKFDEDARRGLERGVNALADAVKVTLGPKGRNVVLEKKFGSPTITNDGVTIAKDIE LEDPFENMGAALVREVATKTNDIAGDGTTTATVLAQSIVHEGMKNVVAGANPMVLKKGIK KATDALVDELKKSAKTVSTKEEKAQVASISAGDEEIGGLIADAMEKVGNDGVITVEESKT METSLETVKGMQFDRGYISPYMVTDPDKMEAVMSNPYVFITDRKITLINDIMPVLEKVVQ QGRELLIIAEDVEGEALATLVVNRLRGTFKAVAVKAPGFGDRRKAMLQDIATLTGATVIS EEVGRKLDSATLADLGTAGQVRVTKDMTTIVDGGGDKQAVADRVASIKAQIPETTSQFDK EKLQERLAKLSGGVAVIKVGAATETELKDKKLRIEDALNATRAAVAEGIVAGGGTALLQV QPVLDELEAKAEGDEKTGIDIVRRAIEAPVRQIASNAGLEGAVIVEAVKKAAKGTGFNAA TEEYVDMIKAGIVDPCKVTRSALQNAASIASMILTTEAVVADKPAEKGAAPAPAMGGGMP GMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACGGTCCTGGCCCAGTCCATCGTCCATGAAGGGATGAAGAACGTGGTGGCCGGTGCC AACCCCATGGTCCTGAAGAAAGGGATCAAGAAAGCCACCGATGCCCTGGTGGACGAACTG AAGAAGAGCGCAAAGACCGTAAGCACCAAGGAAGAAAAGGCACAGGTTGCCTCCATTTCC GCCGGTGACGAAGAAATCGGCGGCCTGATCGCCGATGCCATGGAAAAAGTGGGCAACGAC GGGGTCATCACCGTGGAAGAATCCAAGACCATGGAAACTTCCCTGGAAACCGTGAAAGGC ATGCAGTTCGACCGTGGGTACATCTCCCCCTACATGGTAACGGATCCGGACAAGATGGAA GCCGTTATGAGCAATCCGTACGTATTCATTACGGATCGGAAGATCACTCTGATCAACGAC ATTATGCCCGTACTGGAAAAAGTGGTGCAACAGGGCCGTGAACTGCTGATCATCGCTGAA GACGTGGAAGGCGAAGCCCTGGCCACCCTGGTTGTGAACCGTCTGCGTGGCACCTTCAAG GCTGTAGCTGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVHEGMKNVVAGANPMVLKKGIKKATDALVDELKKSAKTVSTKEEKAQVASIS AGDEEIGGLIADAMEKVGNDGVITVEESKTMETSLETVKGMQFDRGYISPYMVTDPDKME AVMSNPYVFITDRKITLINDIMPVLEKVVQQGRELLIIAEDVEGEALATLVVNRLRGTFK AVAV |