RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b9945 |
| Chaperonin Group: | I |
| Deposit Date: | 2006-12-27 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Thermotoga |
| Species: | petrophila |
| Strain: | RKU-1 |
| Lineage: | root; cellular organisms; Bacteria; Thermotogae; Thermotogae (class); Thermotogales; Thermotogaceae; Thermotoga |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP000702 |
| Peptide Genbank Accession: | ABQ46439 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome shotgun sequence. Type strain synonyms strain RKU-1 = DSM 13995 = JCM 10881. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGCCGAAGATTCTGAAGTTCAATGAAGAAGCGAGAAGGGCACTCGAAAGAGGTGTGGAC AAGGTTGCTAACGCGGTAAAGGTGACTCTCGGACCGAAGGGAAGGAACGTTGTTATCGAA AAATCGTGGGGTTCTCCAACAATAACCAACGACGGTGTTTCCATAGCCAAGGAGATTGAG CTCGAGGACAAATTCGAAAACCTCGGGGCTCAGCTCGTGAAAGAAGTTGCTTCCAAAACA AACGACGTTGCCGGTGATGGTACAACAACTGCTACGGTTCTCGCACAGGCTATGATCAAA GAAGGTCTCAAGAACGTTGCAGCGGGCGCCAATCCAATTCTCCTCAAGAGGGGTATAGAC AAAGCCGTTGAGAAAGCCGTTGAAGAGATCAAGAAGGTCTCCAAGAAACTTTCCGGTAGG GAGGACATTGCCCACGTTGCCGCTATATCTGCGAACAGCGCCGAAATAGGAGAGCTCATC GCAGAAGCTATGGACAAGGTAGGAGAAGACGGGGTCATCACTGTGGAAGATTCCAAAACA CTCGAAACCTACGTTGAATTCACCGAAGGTATGCAGTTTGACAGAGGTTACATCTCACCA TACTTCGTCACGGATGCCGAGAAGATGGAGGTCGTTCTGAAGGAACCCTTCATACTCATC ACTGACAGGAAACTCAGCGCTGTGAAACCTCTCATTCCGATCCTTGAAAAGGTCGCTCAG ACCGGAAGACCACTTCTCGTTATAGCGGAAGACGTTGAAGGAGAAGTTCTGACAACACTT GTTCTCAACAAACTCAAGGGTACTCTCCAGTCCTGTGCCGTGAAGGCTCCTGGATTCGGT GAAAGAAGAAAAGCCATGCTTCAGGACATAGCAATTCTCACCGGAGGTCAGGTGGCAAGT GAAGAGCTCGGAATCAATCTCGAAGATCTCACCCTTGAAGATCTCGGAAGAGCCGATCTT GTGAGGGTCAAGAAAGATGAAACCATCATAATTGGAGGAAAAGGTGATCCAGAGGCTATC AAGAAGAGAATCGCTCAAATCAAAGCCCAGATAGAGGAAACCACATCTGAGTACGAAAAA GAAACTCTCCAGGAAAGGATGGCAAAACTCGCAGGAGGAGTAGCCGTCATAAAGGTTGGA GCGGCCACCGAAACAGAGCTCAAGGAAAAGAAACACAGAATTGAAGACGCACTGAGCGCT ACAAGAGCAGCCGTTGAAGAAGGTATCGTTCCCGGTGGAGGAGTAACACTCCTGAGAGCA AGAAAGGCCGTTGAAAAGGTCATAGAAGAGCTCGAAGGCGACGAGAAGATAGGAGCACAG ATCGTTTACAAGGCACTCTCAGCCCCCATTAAGCAGATTGCTGAAAACGCAGGATACGAC GGAGCGGTGATCATAGAGAAGATACTCTCGAATGACGATCCAGCCTATGGATTCGACGCA CTCAGGGGAGAATACTGCAACATGTTTGAAAGAGGAATCATTGACCCAGCAAAGGTTACA AGGAGCGCCCTGCAGAACGCCGCGTCCATCGCTGGAATGCTCCTGACAACGGAAGTGCTC ATCGTTGAAAAACCCGAGGAGAAAAAAGAAACACCGAGTATTCCTGAAGAATTCTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MPKILKFNEEARRALERGVDKVANAVKVTLGPKGRNVVIEKSWGSPTITNDGVSIAKEIE LEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGID KAVEKAVEEIKKVSKKLSGREDIAHVAAISANSAEIGELIAEAMDKVGEDGVITVEDSKT LETYVEFTEGMQFDRGYISPYFVTDAEKMEVVLKEPFILITDRKLSAVKPLIPILEKVAQ TGRPLLVIAEDVEGEVLTTLVLNKLKGTLQSCAVKAPGFGERRKAMLQDIAILTGGQVAS EELGINLEDLTLEDLGRADLVRVKKDETIIIGGKGDPEAIKKRIAQIKAQIEETTSEYEK ETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRA RKAVEKVIEELEGDEKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDA LRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPSIPEEF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACGGTTCTCGCACAGGCTATGATCAAAGAAGGTCTCAAGAACGTTGCAGCGGGCGCC AATCCAATTCTCCTCAAGAGGGGTATAGACAAAGCCGTTGAGAAAGCCGTTGAAGAGATC AAGAAGGTCTCCAAGAAACTTTCCGGTAGGGAGGACATTGCCCACGTTGCCGCTATATCT GCGAACAGCGCCGAAATAGGAGAGCTCATCGCAGAAGCTATGGACAAGGTAGGAGAAGAC GGGGTCATCACTGTGGAAGATTCCAAAACACTCGAAACCTACGTTGAATTCACCGAAGGT ATGCAGTTTGACAGAGGTTACATCTCACCATACTTCGTCACGGATGCCGAGAAGATGGAG GTCGTTCTGAAGGAACCCTTCATACTCATCACTGACAGGAAACTCAGCGCTGTGAAACCT CTCATTCCGATCCTTGAAAAGGTCGCTCAGACCGGAAGACCACTTCTCGTTATAGCGGAA GACGTTGAAGGAGAAGTTCTGACAACACTTGTTCTCAACAAACTCAAGGGTACTCTCCAG TCCTGTGCCGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMIKEGLKNVAAGANPILLKRGIDKAVEKAVEEIKKVSKKLSGREDIAHVAAIS ANSAEIGELIAEAMDKVGEDGVITVEDSKTLETYVEFTEGMQFDRGYISPYFVTDAEKME VVLKEPFILITDRKLSAVKPLIPILEKVAQTGRPLLVIAEDVEGEVLTTLVLNKLKGTLQ SCAV |