RECORD DETAILS
For pacc CP000393, see also: b4417
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b4416 |
| Chaperonin Group: | I |
| Deposit Date: | 2003-10-03 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Trichodesmium |
| Species: | erythraeum |
| Strain: | IMS101 |
| Lineage: | root; cellular organisms; Bacteria; Cyanobacteria; Oscillatoriales |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP000393 |
| Peptide Genbank Accession: | ABG53320 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome sequence. One of two cpn60 genes in this organism. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAACGTATTATCTACAACGAAAATGCTCGTCGCGCCTTAGAAAAAGGTATGGAT ATTCTTGCGGAGTCTGTAGCAGTAACACTCGGTCCTAAAGGTCGAAACGTTGTTCTTGAG AAAAAATTTGGCGCACCCCAAATTGTTAATGATGGTGTAACAATTGCTAAAGAAATTGAA TTGGAAGACCATGTAGAAAATACTGGTGTTTCCCTAATTCGTCAAGCAGCTTCCAAAACT AACGATGCAGCAGGTGATGGTACAACCACTGCAACTGTACTTGCTCATGCAATGGTAAAA GAAGGTCTACGGAACGTGGCTGCTGGCGCAAACCCTATTGCTCTCAAGCGTGGTATTGAC AAAGCTGCTGGTTTTCTAGTAGAAAAAATTGCTGAACATGCTCGTCAAATTGAAGATTCC AAGGCGATAGCTCAAGTTGGTGCTATTTCTGCTGGTAATGATGAAGAAGTAGGTAAAATG ATTGCCGAAGCCATGGATAAAGTGGGTAAAGAAGGTGTGATTTCTCTTGAAGAAGGAAAG TCAATGCAGACTGAGTTGGAAATTACTGAAGGTATGCGCTTTGACAAGGGTTACATCTCT CCCTACTTCGCAACAGACATGGAACGGATGGAAGCTTCTCTTGAAGAACCTCAGATTCTG ATAACTGATAAGAAAATTGCTTTAGTACAAGACTTAGTACCAGTATTAGAACAAGTTGCT CGTTCTGGCAAACCATTATTAATATTGGCTGAAGATATTGAGAAAGAAGCTTTGGCAACC CTAGTTGTTAACCGTTTACGGGGTGTAGTGAATGTTGCTGCAGTTAAAGCTCCTGGTTTT GGGGATCGTCGTAAAGCTATGTTAGAAGATATCGCGGTATTAACTGGCGGTCAAGTTATC ACTGAAGATGCTGGCTTGAAACTAGAAAATGCCAAGTTAGATATGCTTGGTAAAGCACGT CGCATTACGATCACTAAAGATAATACTACTATCGTTGCTGAAGGTAACGAAAAAGAAGTT AAAGCACGTTGCGAACAAATTCGTCGTCAAATGGATGAAACTGACTCTTCCTACGACAAA GAGAAATTACAAGAGCGTTTAGCTAAATTAGCTGGTGGTGTAGCGGTTGTTAAAGTTGGT GCTGCTACTGAAACAGAAATGAAAGATCGCAAGTTACGCTTGGAAGATGCTATCAACGCA ACTAAAGCTGCTGTAGAAGAAGGTATCGTTCCTGGTGGTGGTACAACTCTAGCGCACTTA GCTCCTGAGTTGGAAACTTGGGCAAATGAAAATCTACAATCTGAAGAGTTAACTGGTTCT TTAATTGTTAGTCGTGCTTTATTAGCTCCACTGAAGCGCATTGCTGAAAATGCTGGGCAA AATGGTGCTGTAATTGGCGAACGGGTGAAAGAGAAGGATTTCAATACTGGTTTTAATGCA GCAAACAATGAGTTTGTTGATATGTTTGAAGCTGGTATTGTTGACCCAGCGAAGGTAACT CGTTCGGCTCTACAAAACGCTGCTTCTATTGCTGGTATGGTGTTAACAACTGAGTGTATT GTTGTTGACAAACCTGAGCCTAAGGAAAACGCACCTGCTGGCGCTGGTATGGGCGGTGGC GATTTCGATTACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKRIIYNENARRALEKGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE LEDHVENTGVSLIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGANPIALKRGID KAAGFLVEKIAEHARQIEDSKAIAQVGAISAGNDEEVGKMIAEAMDKVGKEGVISLEEGK SMQTELEITEGMRFDKGYISPYFATDMERMEASLEEPQILITDKKIALVQDLVPVLEQVA RSGKPLLILAEDIEKEALATLVVNRLRGVVNVAAVKAPGFGDRRKAMLEDIAVLTGGQVI TEDAGLKLENAKLDMLGKARRITITKDNTTIVAEGNEKEVKARCEQIRRQMDETDSSYDK EKLQERLAKLAGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL APELETWANENLQSEELTGSLIVSRALLAPLKRIAENAGQNGAVIGERVKEKDFNTGFNA ANNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKENAPAGAGMGGG DFDY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTACTTGCTCATGCAATGGTAAAAGAAGGTCTACGGAACGTGGCTGCTGGCGCA AACCCTATTGCTCTCAAGCGTGGTATTGACAAAGCTGCTGGTTTTCTAGTAGAAAAAATT GCTGAACATGCTCGTCAAATTGAAGATTCCAAGGCGATAGCTCAAGTTGGTGCTATTTCT GCTGGTAATGATGAAGAAGTAGGTAAAATGATTGCCGAAGCCATGGATAAAGTGGGTAAA GAAGGTGTGATTTCTCTTGAAGAAGGAAAGTCAATGCAGACTGAGTTGGAAATTACTGAA GGTATGCGCTTTGACAAGGGTTACATCTCTCCCTACTTCGCAACAGACATGGAACGGATG GAAGCTTCTCTTGAAGAACCTCAGATTCTGATAACTGATAAGAAAATTGCTTTAGTACAA GACTTAGTACCAGTATTAGAACAAGTTGCTCGTTCTGGCAAACCATTATTAATATTGGCT GAAGATATTGAGAAAGAAGCTTTGGCAACCCTAGTTGTTAACCGTTTACGGGGTGTAGTG AATGTTGCTGCAGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAHAMVKEGLRNVAAGANPIALKRGIDKAAGFLVEKIAEHARQIEDSKAIAQVGAIS AGNDEEVGKMIAEAMDKVGKEGVISLEEGKSMQTELEITEGMRFDKGYISPYFATDMERM EASLEEPQILITDKKIALVQDLVPVLEQVARSGKPLLILAEDIEKEALATLVVNRLRGVV NVAAV |