RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b16607 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-04-05 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Shewanella |
| Species: | violacea |
| Strain: | DSS12 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AP011177 |
| Peptide Genbank Accession: | BAJ00337 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms DSS12 = CIP 106290 = JCM 10179 = LMG 19151. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGAAGTATTATTTGGTAACGACGCACGTGTAAAAATGCTTGCGGGCGTA AACATTCTGGCAAACGCAGTTAAAGTCACTTTGGGCCCTAAGGGTCGTAACGTAATTCTG GATAAGAGTTTCGGCGCACCACTGATCACCAAAGATGGTGTCACAGTGGCTAAAGATATC GAACTTGAAGACAAGATCGAGAACATGGGCGCACAGATGGTTAAAGAAGTTGCTTCTAAA GCCAACGACGAAGCCGGTGACGGTACCACTACCGCTACCGTTCTTGCTCAAGCAATTGTT AACGAAGGCCTTAAAGCCGTCGCTGCTGGCATGAACCCAATGGATCTTAAGCGCGGTATC GACAAGGCTGTAGTTGCCGCTGTTGCCGAGCTTAAAAACCTATCTCAAGAATGTAGCGAT TCTCAAGCTATCACTCAGGTTGGTACTATCTCAGCTAACTCAGACGAGACTATCGGCCAA ATCATCGCAACAGCGATGGATCGTGTAGGCAAAGAAGGCGTTATTACAGTTGAAGAAGGT CAGGCTCTGGAAAACGAGCTAGACGTAGTAGAAGGTATGCAGTTCGATCGCGGTTACCTG TCTCCATACTTCATCAACAAGCCAGAAACTGGCAGCGTTGAGCTAGAAAGCCCATACATA CTTCTTGTAGACAAGAAAGTGTCTAACATTCGTGAGCTACTGCCTATCCTTGAAGGTTTG GCTAAGACTGGTAAGCCACTGCTTATCGTCGCCGAAGACGTTGAAGGTGAAGCACTAGCG ACACTAGTCGTAAACAACATGCGCGGAATCGTGAAAGTTGCTGCCGTTAAGGCACCAGGT TTCGGTGACCGTCGTAAGGCTATGCTACAAGATATCGCTATCTTGACTGGCGGCACAGTT ATCGCTGAAGAGATTGGTCTAGAGCTTGAGAAAGCGACTCTAGAAGATCTTGGTACAGCT AAGCGCGTTATCATCACTAAAGATGACACTACTATCATCGACGGTAATGGTGAAGAGAGC CAAATTAAGGCTCGCGTTTCACAAATCAAGATCCAGGCTGAAGAGTCTACATCTGATTAC GACAAAGAGAAGCTACAAGAGCGCATGGCTAAGCTAGCCGGCGGTGTTGCAGTTATCAAG GTCGGTGCAGCTACCGAAGTTGAGATGAAAGAGAAGAAGGCACGTGTAGAAGATGCACTT CACGCGACTCGCGCAGCAGTCGAAGAGGGTGTTGTAGCCGGTGGTGGTGTTGCTCTGGTA CGTGTTGCTAGCAAGATTGCTGACATTGAAGTACTTAACGAAGACCAGAAGCACGGCGTA GTTATCGCAATTCGTGCCATGGAAGCTCCTCTACGCCAGATCGCCGCTAACGCAGGTGAA GAAGGTTCAGTTGTTGCTAACAACGTTAAGAACGGTACTGGTAACTACGGTTACAACGCA GGTAACGACACTTACGGTGACATGCTTGAGATGGGTATCCTAGATCCAACTAAAGTGACT CGTAGCGCGCTACAGTTTGCAGCATCTATTGCTGGTCTGATGATCACCACAGAATGTATG ATTGCCGATGTACCACAAGATGCTTCTGCACCTGATATGGGTGGTATGGGTGGTATGGGC GGTATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVLFGNDARVKMLAGVNILANAVKVTLGPKGRNVILDKSFGAPLITKDGVTVAKDI ELEDKIENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVVAAVAELKNLSQECSDSQAITQVGTISANSDETIGQIIATAMDRVGKEGVITVEEG QALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPYILLVDKKVSNIRELLPILEGL AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV IAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGNGEESQIKARVSQIKIQAEESTSDY DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV RVASKIADIEVLNEDQKHGVVIAIRAMEAPLRQIAANAGEEGSVVANNVKNGTGNYGYNA GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMIADVPQDASAPDMGGMGGMG GMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTCTTGCTCAAGCAATTGTTAACGAAGGCCTTAAAGCCGTCGCTGCTGGCATG AACCCAATGGATCTTAAGCGCGGTATCGACAAGGCTGTAGTTGCCGCTGTTGCCGAGCTT AAAAACCTATCTCAAGAATGTAGCGATTCTCAAGCTATCACTCAGGTTGGTACTATCTCA GCTAACTCAGACGAGACTATCGGCCAAATCATCGCAACAGCGATGGATCGTGTAGGCAAA GAAGGCGTTATTACAGTTGAAGAAGGTCAGGCTCTGGAAAACGAGCTAGACGTAGTAGAA GGTATGCAGTTCGATCGCGGTTACCTGTCTCCATACTTCATCAACAAGCCAGAAACTGGC AGCGTTGAGCTAGAAAGCCCATACATACTTCTTGTAGACAAGAAAGTGTCTAACATTCGT GAGCTACTGCCTATCCTTGAAGGTTTGGCTAAGACTGGTAAGCCACTGCTTATCGTCGCC GAAGACGTTGAAGGTGAAGCACTAGCGACACTAGTCGTAAACAACATGCGCGGAATCGTG AAAGTTGCTGCCGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVAELKNLSQECSDSQAITQVGTIS ANSDETIGQIIATAMDRVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETG SVELESPYILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIV KVAAV |