RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b9434 |
| Chaperonin Group: | I |
| Deposit Date: | 2006-10-09 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Bordetella |
| Species: | avium |
| Strain: | 197N |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AM167904 |
| Peptide Genbank Accession: | CAJ48184 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence of chicken pathogenic strain. Smallest Bordetella genome sequenced to date. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCCAAGCAAGTTCTGTTTGCCGATGATGCCCGCGTGCGCATTGTTCGCGGCGTG AATGTTCTCGCCAACGCTGTTAAGACCACCCTGGGCCCCAAGGGTCGCAACGTCGTGCTG GAGCGCTCCTTCGGCGCCCCGACCGTGACCAAGGACGGTGTGTCCGTCGCCAAGGAAATC GAACTGAAGGACAAGTTCGAAAACATCGGCGCCCAGCTCGTCAAGGACGTTGCCTCCAAG ACCTCCGACAACGCCGGTGACGGCACCACGACCGCCACCGTGCTGGCTCAAGCCATCGTT CAAGAAGGCTTGAAGTACGTTGCCGCCGGTTTCAACCCGATCGACCTGAAGCGCGGTATC GACAAGGCTGTCGCCGCCGCCGTGGTTGAGCTGAAGAAGGCCTCCAAGCCGGTCACGACC AGCAAGGAAATCGCCCAGGTTGGCTCGATCTCGGCCAACAGCGACAGCTCGATCGGCCAG ATCATCGCTGACGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGC AAGTCGCTGGAAAACGAACTGGATGTCGTCGAAGGCATGCAGTTTGACCGTGGCTATCTG TCGCCCTACTTCATCAACAACCCCGAAAAGCAAGTCGCCGCTCTGGACGATCCCTTCGTC CTGATCTACGACAAGAAGATCAGCAACATCCGTGATCTGCTGCCGGTGCTGGAGCAAGTC GCCAAGTCGAGCCGTCCGCTGCTGATCATCGCCGAAGACGTCGAGGGCGAAGCCCTGGCG ACCCTGGTGGTGAACAACATCCGTGGCATCCTGAAGACCACCGCCGTCAAGGCGCCGGGC TTTGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACGGGCGGCACCGTG ATCTCGGAAGAGACCGGCATGTCGCTGGAAAAGGCCACCCTGCAAGAACTGGGCCAAGCC AAGCGCATCGAAGTCGCCAAGGAAAACACCACGATCATCGACGGCGCCGGCGACGGCAAG TCGATCGAAGCGCGCGTCAAGCAAATCCGCGCCCAGATCGAGGAAGCGACCTCCGACTAC GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCGGCGGTGTTGCCGTGATCCGC GTCGGTGCCGCGACCGAAGTCGAAATGAAGGAAAAGAAAGCTCGCGTCGAAGACGCCCTG CACGCCACCCGCGCTGCAGTGGAAGAAGGCGTTGTGGCTGGCGGCGGCGTTGCCCTGCTG CGCGCCAAGCAAGCCATTGCCGGTCTGCAAGGCGACACGCCCGACCAGAACGCGGGCATC AAGCTGATCCTGCGCGCTGTGGAAGAGCCCCTGCGCACCATCGTGACCAACGCCGGCGAA GAAGCCAGCGTGGTGGTGAACAACGTCCTGAACGGCAAGGGTAACTACGGTTACAACGCC GCTACCGGCGAGTACACCGACCTGGTCGAGCAAGGCGTTCTGGACCCCACCAAGGTGACC CGTACCGCCCTGCAAAACGCCGCTTCGGTGGCCAGCCTGCTGCTGACGGCTGAAGCCGCC GTGGTGGAACTGGCTGAGGACAAGCCCGCTGCCCCGGCCATGCCCGGCGGCATGGGTGGC ATGGGCGGCATGGACTTCTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKQVLFADDARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGI DKAVAAAVVELKKASKPVTTSKEIAQVGSISANSDSSIGQIIADAMDKVGKEGVITVEDG KSLENELDVVEGMQFDRGYLSPYFINNPEKQVAALDDPFVLIYDKKISNIRDLLPVLEQV AKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV ISEETGMSLEKATLQELGQAKRIEVAKENTTIIDGAGDGKSIEARVKQIRAQIEEATSDY DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL RAKQAIAGLQGDTPDQNAGIKLILRAVEEPLRTIVTNAGEEASVVVNNVLNGKGNYGYNA ATGEYTDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELAEDKPAAPAMPGGMGG MGGMDF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCTCAAGCCATCGTTCAAGAAGGCTTGAAGTACGTTGCCGCCGGTTTC AACCCGATCGACCTGAAGCGCGGTATCGACAAGGCTGTCGCCGCCGCCGTGGTTGAGCTG AAGAAGGCCTCCAAGCCGGTCACGACCAGCAAGGAAATCGCCCAGGTTGGCTCGATCTCG GCCAACAGCGACAGCTCGATCGGCCAGATCATCGCTGACGCGATGGACAAGGTCGGCAAG GAAGGCGTCATCACCGTCGAAGACGGCAAGTCGCTGGAAAACGAACTGGATGTCGTCGAA GGCATGCAGTTTGACCGTGGCTATCTGTCGCCCTACTTCATCAACAACCCCGAAAAGCAA GTCGCCGCTCTGGACGATCCCTTCGTCCTGATCTACGACAAGAAGATCAGCAACATCCGT GATCTGCTGCCGGTGCTGGAGCAAGTCGCCAAGTCGAGCCGTCCGCTGCTGATCATCGCC GAAGACGTCGAGGGCGAAGCCCTGGCGACCCTGGTGGTGAACAACATCCGTGGCATCCTG AAGACCACCGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVQEGLKYVAAGFNPIDLKRGIDKAVAAAVVELKKASKPVTTSKEIAQVGSIS ANSDSSIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINNPEKQ VAALDDPFVLIYDKKISNIRDLLPVLEQVAKSSRPLLIIAEDVEGEALATLVVNNIRGIL KTTAV |