RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b3103 |
| Chaperonin Group: | I |
| Deposit Date: | 2002-05-02 |
| Type: | lib |
| Type strain?: | no |
| Genus: | Clone |
| Species: | Unknown |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroides (class); Bacteroidales |
| Original ID: | p40-0228 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AF437279 |
| Peptide Genbank Accession: | AAM49540 |
| Best FASTA Match: | b18909 Paraprevotella xylaniphila YIT 11841 DSM 19681 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 78.400 |
| Best BLASTP Match: | b19953 Paraprevotella clara YIT 11840 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 94.054 |
| Source: | microbial population study clone library |
| Notes: | Uncultured pig faeces bacterium, p40 library. Frequency 1/1125. |
| Full Nucleotide Sequence: | - |
| Full Peptide Sequence: | - |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTGGCACAGGCCATCGTACGTGAGGGCTTGAAGAATGTTGCCGCCGGAGCA AATCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTCAATGCAGTCGTAGAGAACATC AAGGCTCAGGCCGAGCAGGTAGGCGACGACTACCAGAAGATTGAGCAGGTGGCTACCGTA AGTGCCAACAACGACCCTGAAATAGGCAAACTCTTGGCAGATGCCATGCAAAAGGTTAGC AAGGATGGAGTAATCACCATCGAGGAGGCCAAGGGACGCGACACTACTATCGGCGTGGTA GAGGGAATGCAGTTCGACAGAGGCTACCTCTCTGCATACTTCGTGACAGACACCGAGAAG ATGGAATGCGTTATGGAGAACCCATACATCCTCATCTACGACAAGAAGATAAGCAGCCTC AAGGATTTCCTCCCCATCCTCGAACCTGCCGTACAGAGCGGCCGTCCCCTTCTGGTTATT GCCGAGGACGTGGATAGCGAGGCTCTCACCACACTCGTTGTCAACAGGCTTCGCTCGCAA CTGAAGATATGTGCCGAC |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVNAVVENIKAQAEQVGDDYQKIEQVATV SANNDPEIGKLLADAMQKVSKDGVITIEEAKGRDTTIGVVEGMQFDRGYLSAYFVTDTEK MECVMENPYILIYDKKISSLKDFLPILEPAVQSGRPLLVIAEDVDSEALTTLVVNRLRSQ LKICAD |