RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b1556 |
Chaperonin Group: | I |
Deposit Date: | 2002-03-11 |
Type: | ref |
Type strain?: | no |
Genus: | Oryza |
Species: | sativa |
Strain: | cv. Nipponbare |
Lineage: | root; cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Liliopsida; commelinids; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | AC092263 |
Peptide Genbank Accession: | AAL83689 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | cpn60 alpha |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCCACCATGCCAAGCACTTGCGCCTCCTCCTCCTCCCTCTTCCTCCTCCTCCGCAGG GACAGGAGGAGCAGCAGGAGTGCCAGCCTCCCCGGACCCGCCCGCCGTTTGGGGGTTGTG CGCGCCTCCGCCAAGGAGATCGCCTTCGACCAGGGATCGCGATCCTCCCTCCAGGCCGGC GTCGAGAAGCTCGCCGCCGCCGTCGCCGTCACCCTCGGTCCCAGAGGAAGAAATGTCGTC TTGGATGAGTTTGGGAGCCCCAAAGTGGTCAATGACGGAGTTACCATTGCTCGAGCTATT GAGCTCGCTGATCCAATGGAGAATGCCGGTGCTGCTTTGATTCGTGAGGTTGCCAGCAAG ACAAATGACTCAGCAGGTGATGGGACTACAACCGCATCTGTCCTGGCTCGTGAGATCATA AAATTGGGCCTGCTGAGTGTTACTTCAGGGGCAAACCCAGTATCTATCAAAAAGGGCATA GATAAGACCGTGCACAGTTTAGTTGAGGAACTTGAGAAGAAGTCAAGGCCTGTGAAGGGC AGTGGTGATATTAAAGCTGTTGCTGCCATATCTGCTGGAAATGATGACTTCGTCGGTACC ATGATCGCTGAGGCTATTGACAAGGTTGGCCCTGATGGTGTTCTTTCGATCGAGTCATCA TCATCTTTTGAGACCACCGTTGAAGTTGAAGAAGGAATGGAGATTGACAGAGGATATATC TCTCCTCAGTTTGTTACAAATCCTGAGAAGTCACTTGTTGAGTTTGAAAATGCTAGAATT CTTGTCACTGACCAGAAGATTTCTTCAATAAAAGAAATAATTCCTTTGCTGGAACAAACA ACTCAACTAAGAGCACCACTCCTCATAATTGCGGAGGATGTAGCTGGCGAAGCTTTGGCA ACTTTAGTTGTCAACAAGCTTAGAGGAATTCTCAATGTAGCTGCGATTAAAGCACCTGGC TTTGGTGAAAGGCGTAAGGCTCTTCTTCAGGACATCGCCATCGTTACAGGTGCTGAATTT CAAGCCAAAGATCTTGGTTTACTGGTGGAGAGTACAACCGTGGAGCAACTTGGCATAGCC CGGAAAGTGACAATCTCCCAGTCATCCACTACCATTATAGCAGATGTTGCCACCAAAGAT GAGATCCAGGCAAGAATTGCACAGCTGAAGAGAGAGCTTTCTCAGACAGACTCAGCATAT GACTCTGAGAAGTTGGCTGAGAGAATCGCAAAGCTTTCTGGCGGAGTTGCGGTTATAAAG GTAGGAGCTGCAACCGAGACAGAGCTTGAGGATCGCAAGCTTCGTATCGAGGATGCCAAG AATGCAACATTTGCTGCTATTGAGGAAGGTATAGTACCTGGAGGTGGTGCGGCCTATGTT CACCTGTCAAAATTTGTACCAGCCATCAAGGAGAAGTTGGATGACCCTGAAGAGCGCCTT GGTGCTGATATCATTCAAAAGGCTCTAGTGGCACCGGCAGCACTAATAGCACACAATGCT GGAGTTGAAGGGGAAGTGATTGTAGAAAAGATCAAGGAGAGTGAATGGGAGGTTGGCTAC AATGCGATGGCTGACAGACACGAGAACTTGGTACAGGCTGGTGTGATTGACCCTGCAAAG GTGACAAGATGTGCGTTGCAAAACGCAGCCTCGGTGGCTGGAATGGTACTAACCACGCAA GCCATCGTTGTGGAGAAGCCAAAGAAGAAGGCGTCGGCGGCTTCCGGGGCACCAGAAGGT TCTCTTGCCATGTGA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MATMPSTCASSSSLFLLLRRDRRSSRSASLPGPARRLGVVRASAKEIAFDQGSRSSLQAG VEKLAAAVAVTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASK TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPVKG SGDIKAVAAISAGNDDFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYI SPQFVTNPEKSLVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVAGEALA TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLVESTTVEQLGIA RKVTISQSSTTIIADVATKDEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIK VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSKFVPAIKEKLDDPEERL GADIIQKALVAPAALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAK VTRCALQNAASVAGMVLTTQAIVVEKPKKKASAASGAPEGSLAM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCATCTGTCCTGGCTCGTGAGATCATAAAATTGGGCCTGCTGAGTGTTACTTCAGGGGCA AACCCAGTATCTATCAAAAAGGGCATAGATAAGACCGTGCACAGTTTAGTTGAGGAACTT GAGAAGAAGTCAAGGCCTGTGAAGGGCAGTGGTGATATTAAAGCTGTTGCTGCCATATCT GCTGGAAATGATGACTTCGTCGGTACCATGATCGCTGAGGCTATTGACAAGGTTGGCCCT GATGGTGTTCTTTCGATCGAGTCATCATCATCTTTTGAGACCACCGTTGAAGTTGAAGAA GGAATGGAGATTGACAGAGGATATATCTCTCCTCAGTTTGTTACAAATCCTGAGAAGTCA CTTGTTGAGTTTGAAAATGCTAGAATTCTTGTCACTGACCAGAAGATTTCTTCAATAAAA GAAATAATTCCTTTGCTGGAACAAACAACTCAACTAAGAGCACCACTCCTCATAATTGCG GAGGATGTAGCTGGCGAAGCTTTGGCAACTTTAGTTGTCAACAAGCTTAGAGGAATTCTC AATGTAGCTGCGATT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPVKGSGDIKAVAAIS AGNDDFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKS LVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVAGEALATLVVNKLRGIL NVAAI |