FASTA FORMAT

FASTA (or Pearson) format is a format for representing DNA or protein sequences. A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. The description line is distinguished from the sequence data by a greater-than (">") symbol in the first column. It is recommended that all lines of text be shorter than 80 characters in length.

Here are a few examples:

>Zymomonas_mobilis
GCAACCGTTCTTGCTCAGGCGATTGTTCGCGAAGGCATGAAATCCGTTGCAGCCGGCATG AACCCGATGGATCTGAAGCGCGGTATTGATCTTGCTGCAACGAAAGTTGTTGAAAGCCTC CGCAGCCGTTCCAAACCGGTTTCCGATTTCAACGAAGTGGCTCAGGTTGGTATCATTTCT GCCAATGGTGACGAAGAAGTAGGTCGTCGCATTGCAGAAGCCATGGAAAAAGTCGGTAAA GAAGGCGTTATCACGGTCGAAGAAGCCAAGGGCTTTGATTTCGAACTGGACGTCGTCGAA GGTATGCAGTTTGATCGCGGCTATCTGTCGCCTTACTTCATCACCAATCCAGAAAAGATG GTCGCAGAACTGGCTGATCCGTATATCCTTATTTACGAGAAGAAGCTTTCTAACCTGCAG TCCATTCTGCCGATCTTGGAATCGGTTGTTCAGTCCGGTCGTCCGCTGTTGATTATCGCT GAAGATATCGAAGGCGAAGCCTTGGCAACATTGGTTGTCAACAAGCTGCGTGGCGGTCTG AAGGTTGCTGCGGTT

>x6174 Enterococcus faecalis
ATVLTQAIVREGLKNVTAGANPLGIRRGIELATKTAVEELHNISSVVDSKEAIAQVAAVS SGSEKVGQLIADAMEKVGNDGVITIEESKGIETELDVVEGMQFDRGYLSQYMVTDNDKME AVLENPYILITDKKISNIQDILPLLEQILQQSRPLLIIADDVDGEALPTLVLNKIRGTFN VVAV

For more detailed information, please follow the link(s) below:

http://tigrblast.tigr.org/web-hmm/fasta.html

Related topics on cpnDB:

FASTA